BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038G04SP1|AL430592
(127 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig959 249 9e-67
>3x_Contig959
Length = 3065
Score = 249 bits (125), Expect = 9e-67
Identities = 126/127 (99%)
Strand = Plus / Minus
Query: 1 gatcctaatgtgaagccatggcaacgtctggaggctaaacctggacaaaaatgttatggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2059 gatcctaatgtgaagccatggcaacgtctggaggctaaacctggacaaaaatgttatggt 2000
Query: 61 tgtcacaatggtttcaagagttcaccggcactggttccttgggataagatgaacccagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1999 tgtcacaatggtttcaagagttcaccggcactggttccttgggataagatgaacccagaa 1940
Query: 121 asaatat 127
| |||||
Sbjct: 1939 agaatat 1933
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 716
Number of Sequences: 1807
Number of extensions: 716
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 127
length of database: 10,358,551
effective HSP length: 15
effective length of query: 112
effective length of database: 10,331,446
effective search space: 1157121952
effective search space used: 1157121952
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.1 bits)